Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935048.1_cds_XP_016480982.1_72370
CDS Infomation

[gene=LOC107802057] [db_xref=GeneID:107802057] [protein=neoxanthin synthase, chloroplastic] [protein_id=XP_016480982.1] [location=complement(32707..34206)] [gbkey=CDS]
Sequence

ATGGAAACTCTTCTCAAACCTTTTCCATCTCCTTTACTTTCCACTCCTACACCTCACAGG
TCTATTTTTCAACTGAATTCTCCTTTTCTGAATCCAACCACCCAGAACTTTTCAAGAAAA
GTTCATCACAGAAACAAAAGTAGTAGTAAAATTTTTTGTAGCTTTCTTGACTTATCACCC
ACATCAAAACCAGAGTCTTTAGATGTTGAAATCTCATGGGTTGATCCTAATTTGGGCCGG
GCTCTATTCGACGTGATCATCATCGGAGCTGGTCCTGCGGGCCTCCGGCTGGCTGAGCAA
GTATCAAGATATGGTATTAAGGTATGTTGTGTTGACCCTTCACCACTTTCCATGTGGCCA
AATAATTATGGTGTTTGGGTTGATGAGTTTGAGAAGTTAGGATTGGAAGATTGTTTAGAT
CATAAGTGGCCTATGACTTGTGTTCATATAAATGATAACAAGACTAAGTATTTGGGAAGA
CCATATGGTAGAGTCAGTAGAAAGAAGTTGAAGTTGAAATTGTTGAATAGTTGTGTTGAA
AATGGAGTGAAGTTTTATAAAGCCAAGGTTTGGAAAGTGGAGCATGAAGAATTTGAGTCT
TCAGTTATTTGTGATGATGGTAGGAAGATAAGGGGTAGTTTGATTGTAGATGCAAGTGGT
TTTGCTAGTCCTTTTATAGAATATGACAAGCCAAGAAACCATGGTTATCAAATTGCTCAT
GGGATTTTAGCAGAAGTGGATAATCATCCATTTGATTTGGATAAAATGGTGCTTATGGAT
TGGAGGGATTCTCATTTGGGAAATGAGCCATATTTGAGGGTGAACAATACTAAAGAACCA
ACATTCTTGTATGCAATGCCATTTGATAGGAATTTGGTATTCTTGGAAGAGACCTCTTTG
GTGAGTCGACCTGTGTTATCGTATAGGGAAGTGAAAAATAGGATGGTGGCAAGGTTAAGG
CATTTGGGGATCAAAGTGAGAAGTGTTATTGAGGATGAGAAATGTGTGATCCCTATGGGA
GGACCACTTCCGCGGATCCCTCAAAATGTTATGGCAATTGGTGGAAATTCAGGGATAGTT
CATCCATCGACAGGGTACATGGTGGCTCGGACCATGGCTTTGGCACCAGTATTGGCTGAG
GCCATTGCTGAAGGTCTTGGATCAACCAGAATGATAAGAGGGTGTCCACTTTACCATAGA
GTTTGGAATGGTTTGTGGCCTTTGGAGAGAAGAAGTGTGAGAGAATGTTACTCTTTTGGG
ATGGAGACTTTGTTGAAGCTTGATTTGAAAGGGACTAGGAGATTGTTTGATGCTTTCTTT
GATCTTGATCCTAAATACTGGCAAGGTTTCCTTTCCTCAAGGTTGTCTGTCAAAGAACTT
GCTATACTCAGCTTGTACCTTTTTGGGCATGCCTCAAATTTGGCTAGGTTTGATATTGTT
ACAAAATGCCCTGTGCCCTTGGCTAGAATGATTGGTAATCTAGCAGTAGAGACCATTTGA

Peptide Sequence

PEP ID

XP_016480982.1
PEP Infomation

PREDICTED: neoxanthin synthase, chloroplastic [Nicotiana tabacum]
Sequence

METLLKPFPSPLLSTPTPHRSIFQLNSPFLNPTTQNFSRKVHHRNKSSSKIFCSFLDLSP
TSKPESLDVEISWVDPNLGRALFDVIIIGAGPAGLRLAEQVSRYGIKVCCVDPSPLSMWP
NNYGVWVDEFEKLGLEDCLDHKWPMTCVHINDNKTKYLGRPYGRVSRKKLKLKLLNSCVE
NGVKFYKAKVWKVEHEEFESSVICDDGRKIRGSLIVDASGFASPFIEYDKPRNHGYQIAH
GILAEVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNNTKEPTFLYAMPFDRNLVFLEETSL
VSRPVLSYREVKNRMVARLRHLGIKVRSVIEDEKCVIPMGGPLPRIPQNVMAIGGNSGIV
HPSTGYMVARTMALAPVLAEAIAEGLGSTRMIRGCPLYHRVWNGLWPLERRSVRECYSFG
METLLKLDLKGTRRLFDAFFDLDPKYWQGFLSSRLSVKELAILSLYLFGHASNLARFDIV
TKCPVPLARMIGNLAVETI

Transcript Sequence

Gene sequence data has not been registered.